Electronic batch record software: five systems read against the batch record rules
Published , reviewed
Verdict
- Best overall
- Composable MESBuilt app by app, so a small manufacturer can move one batch record first, and its own documentation describes the name, date and time and meaning on each signature, the link between signature and record, two-component signing and the audit trail, with a validation package for customers.
- Best for a large drug site
- PAS-X MESKörber aims PAS-X at large, highly integrated drug sites, with PAS-X Neo for smaller ones, and names EU GMP Annex 11, which matters where a Qualified Person certifies EU batches; its signature and audit trail controls are claimed rather than described, so test them in the demo.
- Best for a device maker
- Critical Manufacturing MES for Medical DevicesBuilt for device makers, with electronic device history records beside batch records under Parts 11 and 820 and validation documents and templates for each qualification phase; its signature and audit trail controls are claimed rather than described, so test them in the demo.
Fig. 01The batch record is the document that goes out the door with every drug batch and device lot: who did each step, who checked it, what the numbers were, and who in quality signed it off. Moved into software it becomes a Part 11 record with a signature at nearly every step, so the signature and audit trail controls carry more weight here than in most systems a plant runs.
This page reads five EBR and MES products for drug and device manufacturing against the Part 11 rows, but starts where an inspector starts: what the predicate rules ask the record to show.
What the rules ask of a batch record
Part 211 writes its signatures into the rule, step by step, so the drug column is long. Since the QMSR took effect on February 2, 2026, the device column points to ISO 13485 for most of the same ground. Read the row for your product type before you read any vendor's feature list; the Part 11 requirements, section by section are the controls that sit on top.
Scroll sideways for both columns
| Record element | Drug maker (21 CFR 211) | Device maker (QMSR, 21 CFR 820) |
|---|---|---|
| The master | Master production and control records are “prepared, dated, and signed (full signature, handwritten) by one person and independently checked, dated, and signed by a second person” § 211.186(a). FDA's 2018 Q&A says e-signatures with the right controls can stand in for that handwritten signature. | The device master record is gone as a term. FDA says its elements are “largely required to be documented by ISO 13485”, and the medical device file must “contain or reference the procedures and specifications that are current on the manufacturing floor” (QMSR preamble, 89 FR 7507). |
| The executed record | One per batch, with “complete information relating to the production and control of each batch”: dates, equipment, component lots, weights, in-process results, yields, labeling and sampling § 211.188(b). It starts as a reproduction of the master, “checked for accuracy, dated, and signed” § 211.188(a). | The device history record is gone as a term too: “many of the requirements previously in the DHR are largely required to be in the medical device or batch record, as described in Clause 7.5.1” (89 FR 7507). The old § 820.184 listed dates, quantities made and released, acceptance records, labeling and the UDI. |
| Who did each step | “Identification of the persons performing and directly supervising or checking each significant step” § 211.188(b)(11). | The QS regulation asked for “the signature of the individual(s) conducting the acceptance activities” former § 820.80(e). Under the QMSR, where ISO 13485 says a record is approved, FDA reads a signature and date, and accepts e-signatures that meet its requirements (89 FR 7514). |
| Second-person checks | Named step by step: dispensing § 211.101(c), charge-in § 211.101(d), yield § 211.103, equipment cleaning § 211.182. With automated equipment under § 211.68(c), one person checks that the equipment did the operation. | Part 820's own sections name no second-person check for production steps. Which steps get one is set by your procedures and risk under ISO 13485. |
| Labeling and identity | Packaging and labeling facilities inspected “immediately before use”, with results “documented in the batch production records” § 211.130(e). | The UDI “must be recorded for each medical device or batch of medical devices” § 820.35(c); labeling is inspected before use and the results documented under Clause 4.2.5 § 820.45(c). |
| Review before release | The quality control unit reviews and approves all production and control records “before a batch is released or distributed” § 211.192. | The QS regulation required release “authorized by the signature of a designated individual(s)” and dated former § 820.80(d). Part 820 no longer spells release out; it falls to ISO 13485, and an approved record there means a signature and date to FDA (89 FR 7514). |
| How long it is kept | “At least 1 year after the expiration date of the batch” § 211.180(a). | Part 820's own sections set no period. § 820.35 builds on Clause 4.2.5 of ISO 13485, Control of Records, which you read for it. |
Who signs each step
In an EBR each signer line below is an electronic signature, so each one needs the printed name, the date and time, and a meaning (§ 11.50(a)). The meaning is where batch records go wrong. “Performed” and “Verified” carry different accountability, and a system that stamps one generic “Signed” on both loses the distinction § 211.188(b)(11) is built on.
Who signs each step
Switch a step to automated equipment to see how § 211.68(c) changes the signatures. Each line is a signature the record must show with a printed name, the date and time, and the meaning.
12 signatures in this record, 5 steps with a second person
01Issue the batch record from the master
No automated form in the rule§ 211.188(a): “An accurate reproduction of the appropriate master production or control record, checked for accuracy, dated, and signed”
- Person issuing the recordPrinted name, date and time, meaning: Checked for accuracy
02Weigh and dispense each component
By hand§ 211.101(c): “Each container of component dispensed to manufacturing shall be examined by a second person”
- Operator who weighedPrinted name, date and time, meaning: Performed
- Second personPrinted name, date and time, meaning: Verified: QC released, weight correct, container identified
03Charge each component into the batch
By hand§ 211.101(d): “added to the batch by one person and verified by a second person”
- Operator who added itPrinted name, date and time, meaning: Performed
- Second personPrinted name, date and time, meaning: Verified
04A significant processing step (blend, granulate, fill)
By hand§ 211.188(b)(11): “Identification of the persons performing and directly supervising or checking each significant step”
- OperatorPrinted name, date and time, meaning: Performed
- Supervisor or checkerPrinted name, date and time, meaning: Checked
05Calculate the actual and theoretical yield
By hand§ 211.103: “performed by one person and independently verified by a second person”
- Person calculatingPrinted name, date and time, meaning: Performed
- Second personPrinted name, date and time, meaning: Independently verified
06Clean dedicated equipment (the log is part of the batch record)
By hand§ 211.182: “The persons performing and double-checking the cleaning and maintenance ... shall date and sign or initial the log”
- Person cleaningPrinted name, date and time, meaning: Performed
- Person double-checkingPrinted name, date and time, meaning: Double-checked
07Quality control unit review before release
No automated form in the rule§ 211.192: “reviewed and approved by the quality control unit ... before a batch is released or distributed”
- Quality control unitPrinted name, date and time, meaning: Reviewed and approved
The list follows Part 211 because Part 211 names the steps. A device maker sets its step signatures in its own procedures under ISO 13485 and should configure the same performed and checked pairs wherever its risk assessment calls for a second person.
Review by exception, and what § 211.192 still asks
On paper, the reviewer turns every page. EBR vendors sell review by exception instead: the system lists what departed from the master (out-of-limit entries, deviations raised, overridden or repeated steps, corrections after signing) and the reviewer works from that list. The phrase is the industry's, not FDA's. The rule still has the quality control unit review and approve all production and control records before release § 211.192.
FDA's 2018 data integrity Q&A ties the audit trail to that review: the people who review the record “should review the audit trails that capture changes to data associated with the record as they review the rest of the record”. Where CGMP sets the frequency, the trail follows it, for example after each significant step under § 211.188(b). The audit trail review checklist builds that plan for one system, and what an audit trail must capture covers the fields.
What makes exception-only review hold up
A clean exception report only means a clean record if the report has been proven to catch every kind of exception it claims to. That is validation of an intended use § 11.10(a): break the record on purpose during testing and show that each break reaches the list. Without that evidence, the reviewer is back to reading the whole record.
Deviations raised on the floor usually leave the batch record for a deviation system, and the link between the two is where investigations get lost; the deviation management software comparison reads that side. These are the seven things to break in a vendor demo, in the order an operator meets them:
- 01
Enter a weight outside the master's limits.
The entry is stopped or flagged, and the flag lands on the reviewer's list. An unexplained discrepancy has to be investigated § 211.192, so it cannot sit quietly in a field.
- 02
Try to sign step 5 before step 4 is done.
The system refuses. Part 11 asks for “operational system checks to enforce permitted sequencing of steps and events, as appropriate” § 11.10(f), and a batch record is where that clause earns its keep.
- 03
Correct a value after it was signed.
The audit trail keeps the old value, because “record changes shall not obscure previously recorded information” § 11.10(e), and the correction shows up on the exception list for the reviewer.
- 04
Sign as the checker with the account that performed the step.
The system refuses. A step “verified by a second person” § 211.101(d) means nothing if one login can do both; this is an authority check § 11.10(g).
- 05
Sign twenty steps in one shift.
The first signing uses every component, later ones in the same continuous session at least one private component § 11.200(a)(1)(i); after a break in the session, every component again § 11.200(a)(1)(ii).
- 06
Print the executed record.
Every signature shows the printed name, the date and time, and the meaning on the printout § 11.50(b). For an EU batch, the printout should show “if any of the data has been changed since the original entry” Annex 11 § 8.2.
- 07
Edit the master while batches are open.
Only authorized people can change a master record § 211.68(b). Check which version each open batch runs on, and that the change itself is signed and trailed.
To check the printed signature block against § 11.50 line by line, use the signature manifestation check. For EU batches, Annex 11 also has the Qualified Person certify release with an electronic signature Annex 11 § 15; the Annex 11 guide covers the rest.
Requirement by requirement
Each cell says how far the vendor's own pages go on one control, read on the vendor's site. Left out: Open-system controls: encryption, digital signatures (§ 11.30), because no product here publishes anything on it. Where a company also sells a quality suite, its Part 11 pages are sometimes written for that suite rather than the MES; the vendor cards say so where it applies. If your batch records and deviations will live in the quality system instead, read the Part 11 compliant eQMS comparison.
Scroll sideways for all vendors
| Requirement | Composable MES | MasterControl Manufacturing Excellence | Critical Manufacturing MES for Medical Devices | PAS-X MES | Apprentice Manufacturing Execution System |
|---|---|---|---|---|---|
| Signature shows name, date and time, and meaning§ 11.50 | verified | stated | stated | stated | stated |
| Two distinct components to sign§ 11.200(a) | verified | stated | stated | stated | stated |
| Signature linked to its record so it cannot be moved§ 11.70 | verified | stated | stated | stated | stated |
| Secure, computer-generated, time-stamped audit trail§ 11.10(e) | verified | stated | stated | stated | stated |
| Audit trail kept as long as the record§ 11.10(e) | verified | stated | stated | stated | stated |
| Access and authority checks by role§ 11.10(d), (g) | verified | stated | stated | stated | stated |
| Accurate, complete copies for inspection§ 11.10(b) | verified | stated | stated | stated | stated |
| Validation documentation to support the customer's own validation§ 11.10(a) | verified | stated | verified | not stated | not stated |
| EU Annex 11 statementEU GMP Annex 11 | stated | not stated | not stated | stated | not stated |
verified: read on the vendor's own documentation on 2026-10-22. stated: the vendor claims it; we did not check. not stated: nothing published.
Vendor by vendor
Each card shows the six rows a signed batch step leans on. The full table is above; the verdict at the top explains the three picks.
Composable MES
MESEBR- What it is
- A no-code, cloud-based manufacturing platform for building apps for electronic batch records, logbooks, weigh and dispense, and sampling. Tulip publishes a GxP requirement trace for each long-term release.
- Who it fits
- Drug and device makers that want to digitize batch records app by app.
| Requirement | Status |
|---|---|
| Signature shows name, date and time, and meaning§ 11.50 | verified |
| Two distinct components to sign§ 11.200(a) | verifiedTulip's help says SAML single sign-on is needed to enforce two components. |
| Signature linked to its record so it cannot be moved§ 11.70 | verified |
| Secure, computer-generated, time-stamped audit trail§ 11.10(e) | verified |
| Access and authority checks by role§ 11.10(d), (g) | verified |
| Validation documentation to support the customer's own validation§ 11.10(a) | verifiedA validation package with release testing reports and traceability. |
verified: read on the vendor's own documentation on 2026-10-22. stated: the vendor claims it; we did not check. not stated: nothing published.
Tulip's own Part 11 pageread 2026-10-22
MasterControl Manufacturing Excellence
MESEBR- What it is
- Manufacturing execution software that digitizes paper and partly digital production records at the line level, including electronic batch records. It integrates with ERP and LIMS systems.
- Who it fits
- Life sciences manufacturers replacing paper batch and production records.
| Requirement | Status |
|---|---|
| Signature shows name, date and time, and meaning§ 11.50 | stated |
| Two distinct components to sign§ 11.200(a) | statedMasterControl describes its dual-password signing for the quality suite, not for Manufacturing Excellence. |
| Signature linked to its record so it cannot be moved§ 11.70 | stated |
| Secure, computer-generated, time-stamped audit trail§ 11.10(e) | statedMasterControl describes its audit trail for the quality suite, not for Manufacturing Excellence. |
| Access and authority checks by role§ 11.10(d), (g) | stated |
| Validation documentation to support the customer's own validation§ 11.10(a) | statedMasterControl's validation tool is described for its products in general. |
verified: read on the vendor's own documentation on 2026-10-22. stated: the vendor claims it; we did not check. not stated: nothing published.
Check with the vendor
Some rows above are stated or not stated on MasterControl's own pages. Ask MasterControl for its validation documentation and test the control in your own validation before you rely on it.
MasterControl's own Part 11 pageread 2026-10-22
Critical Manufacturing MES for Medical Devices
MESEBR- What it is
- Manufacturing execution software for device makers with electronic device history records, electronic batch records, lot and unit tracking and genealogy. It also covers weigh and dispense for formulation steps.
- Who it fits
- Medical device manufacturers that need eDHR under Parts 11 and 820.
| Requirement | Status |
|---|---|
| Signature shows name, date and time, and meaning§ 11.50 | stated |
| Two distinct components to sign§ 11.200(a) | stated |
| Signature linked to its record so it cannot be moved§ 11.70 | stated |
| Secure, computer-generated, time-stamped audit trail§ 11.10(e) | stated |
| Access and authority checks by role§ 11.10(d), (g) | stated |
| Validation documentation to support the customer's own validation§ 11.10(a) | verifiedValidation documentation and templates for each qualification phase. |
verified: read on the vendor's own documentation on 2026-10-22. stated: the vendor claims it; we did not check. not stated: nothing published.
Check with the vendor
Some rows above are stated or not stated on Critical Manufacturing's own pages. Ask Critical Manufacturing for its validation documentation and test the control in your own validation before you rely on it.
Critical Manufacturing's own Part 11 pageread 2026-10-22
PAS-X MES
MESEBR- What it is
- Manufacturing execution software for life sciences production, run on-premise, in a private cloud or as SaaS. Körber offers PAS-X Neo for smaller sites with more standard processes.
- Who it fits
- Large, highly integrated drug manufacturing sites, with PAS-X Neo for smaller ones.
| Requirement | Status |
|---|---|
| Signature shows name, date and time, and meaning§ 11.50 | stated |
| Two distinct components to sign§ 11.200(a) | stated |
| Signature linked to its record so it cannot be moved§ 11.70 | stated |
| Secure, computer-generated, time-stamped audit trail§ 11.10(e) | stated |
| Access and authority checks by role§ 11.10(d), (g) | stated |
| Validation documentation to support the customer's own validation§ 11.10(a) | not statedKörber says pre-configured content reduces validation effort; no validation documents for customers are named. |
verified: read on the vendor's own documentation on 2026-10-22. stated: the vendor claims it; we did not check. not stated: nothing published.
Check with the vendor
Some rows above are stated or not stated on Körber's own pages. Ask Körber for its validation documentation and test the control in your own validation before you rely on it.
Körber's own Part 11 pageread 2026-10-22
Apprentice Manufacturing Execution System
MESEBR- What it is
- Manufacturing execution software for biopharma with operator-owned authoring and dynamic batch execution. Apprentice states deployment in 90 days or less.
- Who it fits
- Biopharma manufacturers that want a short MES rollout.
| Requirement | Status |
|---|---|
| Signature shows name, date and time, and meaning§ 11.50 | stated |
| Two distinct components to sign§ 11.200(a) | stated |
| Signature linked to its record so it cannot be moved§ 11.70 | stated |
| Secure, computer-generated, time-stamped audit trail§ 11.10(e) | stated |
| Access and authority checks by role§ 11.10(d), (g) | stated |
| Validation documentation to support the customer's own validation§ 11.10(a) | not statedApprentice claims IQ/OQ validation; documents or services for customers are not named. |
verified: read on the vendor's own documentation on 2026-10-22. stated: the vendor claims it; we did not check. not stated: nothing published.
Check with the vendor
Some rows above are stated or not stated on Apprentice's own pages. Ask Apprentice for its validation documentation and test the control in your own validation before you rely on it.
Apprentice's own Part 11 pageread 2026-10-22
How we read the vendors
Verdicts are editorial: no vendor can buy a verdict position or displace another vendor.
verified means we read the control described on the vendor's own documentation (help centre, validation pack page, compliance paper or trust page) on 2026-10-22. stated means the vendor claims it and we did not check it. not stated means the vendor publishes nothing on it.
FDA keeps no list of certified or approved Part 11 software. Compliance is a validation claim each regulated company makes for its own use of a system, so a vendor's Part 11 claim is where your validation starts, not where it ends.
Who is not in the table
Some MES vendors' pages could not be read on the read date, so they are left out rather than guessed at. A vendor missing here is a vendor we could not read, not one we ruled out.
Questions
What is an electronic batch record?
The executed batch production and control record kept in software: generated from the approved master, filled in step by step on the floor, signed by the people who did and checked each step, and reviewed by quality before release. For a drug maker its content is set by § 211.188. Because a predicate rule requires it and it is kept electronically, Part 11 applies to it (§ 11.1(b)); the Part 11 requirements, section by section are the controls it has to meet.
Is an EBR the same as an MES?
No, though they are usually sold together. A manufacturing execution system runs the floor (orders, equipment, materials, weigh and dispense); the batch record is the signed evidence it produces. Every product on this page is sold as an MES with the batch record as one function, so ask which modules your licence and your validation actually cover.
§ 211.186 says the master is signed by hand. Can it be signed electronically?
Yes. FDA's 2018 data integrity Q&A says “electronic signatures with the appropriate controls can be used instead of handwritten signatures or initials in any CGMP required record”, and it names § 211.186(a), the “full signature, handwritten” line, as one of them. The appropriate controls are Part 11's signature sections.
If equipment does the step, do we still need a second person?
Not for the operation itself. Under § 211.68(c), automated equipment can satisfy the one-person-does, another-checks requirements of §§ 211.101(c) and (d), 211.103, 211.182 and 211.188(b)(11) “if such equipment is used in conformity with this section, and one person checks that the equipment properly performed the operation”. So one signature stays, and the equipment has to be calibrated and checked under a written program (§ 211.68(a)).
Does FDA accept review by exception?
The regulation does not use the term. § 211.192 has the quality control unit review and approve all production and control records before release, and FDA's 2018 Q&A puts the audit trail inside that review. Reviewing by exception is a way of doing that review, not of skipping it, and it holds only if the exception report has been tested to catch what it claims.
What happened to the device history record under the QMSR?
The QMSR took effect on February 2, 2026 and dropped the term. FDA says “many of the requirements previously in the DHR are largely required to be in the medical device or batch record, as described in Clause 7.5.1” of ISO 13485, and § 820.35(c) still requires the UDI for each device or batch. Part 11 still applies: the QMSR supplements FDA's other regulations (§ 820.1(b)). The QMSR guide for small device makers covers the rest of the change.
How much of an EBR do we validate ourselves?
The parts you use, to the depth their risk calls for. For device makers, FDA's computer software assurance guidance covers software used in production and the quality system, and sorts features into “high process risk” and not. FDA wrote it for device makers; drug makers often borrow its risk ideas. The CSA validation scope planner sizes it per feature, and computer system validation for small labs covers the lifecycle.
Does FDA certify EBR software as Part 11 compliant?
No. FDA keeps no list of certified or approved Part 11 software. Part 11 binds the people who use a system, and its only certification is the letter a company sends FDA about its own electronic signatures (§ 11.100(c)).
How long do we keep batch records?
For a US drug batch, at least one year after the batch's expiration date (§ 211.180(a)). EU GMP Chapter 4.11 asks for one year after expiry or at least five years after the Qualified Person certifies the batch, whichever is longer. Part 11 sets no period of its own; the audit trail is kept as long as the record (§ 11.10(e)).
Sources
- 21 CFR Part 211, CGMP for Finished Pharmaceuticals (§§ 211.68, 211.101, 211.103, 211.130, 211.180, 211.182, 211.186, 211.188, 211.192), eCFRread 2026-10-22
- 21 CFR Part 11, Electronic Records; Electronic Signatures, eCFRread 2026-10-22
- 21 CFR Part 820, Quality Management System Regulation (§§ 820.1, 820.35, 820.45), eCFRread 2026-10-22
- 21 CFR Part 820 as in force before February 2, 2026 (former §§ 820.80, 820.184), eCFRread 2026-10-22
- Medical Devices; Quality System Regulation Amendments, final rule, 89 FR 7496 (2024), Federal Registerread 2026-10-22
- Data Integrity and Compliance With Drug CGMP: Questions and Answers (2018), FDAread 2026-10-22
- Computer Software Assurance for Production and Quality Management System Software (guidance, 2026), FDAread 2026-10-22
- EudraLex Volume 4, Annex 11: Computerised Systems (2011), European Commissionread 2026-10-22
- EudraLex Volume 4, Chapter 4: Documentation (2011), European Commissionread 2026-10-22